Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915027.1_cds_XP_016464951.1_57945
CDS Infomation

[gene=LOC107787852] [db_xref=GeneID:107787852] [protein=cysteine proteinase RD21a-like] [protein_id=XP_016464951.1] [location=join(18168..18645,19472..19707,19826..19966,20172..20624,20879..20977)] [gbkey=CDS]
Sequence

ATGACTTTTTTCAGGTCGTTCTTATTCTTTCTTCTCACCTTATTTGTTATTTCATCTGCA
CTCGACATGTCCATCATTAGTTACGACGAACAGCACGGCCAGATGGGGACAACACATCAT
CGTACTGACGATGAAGTCAGAGAATTGTACGAATCGTGGCTTGTTAAGCACGGAAAGAAT
TACAATGCCATCGGAGAGAAAGAGAGAAGATTTGAGATTTTTAACGATAATTTAAGATTC
ATCGACGAGCACAACGCTGAGAACCGCTCATATAAACTTGGGTTGAATCGATTCTCTGAT
CTTACCAACGAGGAATACCGTGCCATGTTCGTAGGTGGACGGTTGGATAGAAAGACGAGG
TTGATGAAGAGCCCTAAAAGTAACCGTTACGCTTTTCAGGCCGGCGAAAAGTTGCCGGAA
TCCGTTGATTGGAGAGAGAAAGGCGCCGTTGCCCCTGTTAAAGATCAAGGCCAATGCGGG
AGTTGTTGGGCATTCTCAACGGTTGGCGCTGTTGAAGGAATAAATAAAATTGTAACGGGT
GAATTAATTAGTCTGTCAGAGCAAGAGCTTGTTGATTGTGATAGGAGTTATAACCAGGGA
TGTAATGGCGGTCTCATGGATTACGCCTTTGATTTCATCAAAAATAACGGTGGCATTGAC
ACTGAAGATGACTACCCTTACCATGCTCAAGATGGCACTTGTGATCCATACAGGAAAAAT
GCCCGTGTTGTCTCCATTGAAGGGTATGAAGATGTTCCAGAAAACGATGAGAAGTCGTTG
ATGAAGGCAGTGGCAAATCAACCAGTTAGTGTTGCTATTGAAGGTGGTGGCAGAGCTTTC
CAGCACTACTCTTCGGGTGTTTTCACTGGATATTGTGGAACGCAACTAGACCATGGTGTA
GTTGTAGTTGGCTATGGAACAGAAAATGGCGAAGATTACTGGATTGTGAGGAATTCATGG
GGTGCTAACTGGGGAGAAAGTGGTTACATCAAGCTTCAGCGCAATTTCGCTAATTCTACA
ACTGGAAAGTGTGGAATTGCAATGCAGGCATCTTATCCTCTTAAGTCTGGCGCAAATCCT
CCTAATCCTGGTCCATCTCCTCCTACTCCTGTAACACCATCAACTGTTTGCGATGAGTAC
TATAGCTGCCCACAGGGCACTACTTGCTGCTGCATTTATCAATATGGCGAATACTGTTTT
GGCTGGGGATGCTGTCCTTATGAGTCTGCTACCTGTTGTGATGATAACTACAGCTGCTGT
CCCCATGATTATCCTGTATGTGATGTTGATGCTGGCACTTGCCTTATGAGCAAGGACAAT
CCATTAAAAGTAAAAGCATTGAAGAGAGGTCCAGCTAGAGTAAACTGGTCAGGGATGAAA
TCTAACAGGAAAGTGAGTTACGTTTGA

Peptide Sequence

PEP ID

XP_016464951.1
PEP Infomation

PREDICTED: cysteine proteinase RD21a-like [Nicotiana tabacum]
Sequence

MTFFRSFLFFLLTLFVISSALDMSIISYDEQHGQMGTTHHRTDDEVRELYESWLVKHGKN
YNAIGEKERRFEIFNDNLRFIDEHNAENRSYKLGLNRFSDLTNEEYRAMFVGGRLDRKTR
LMKSPKSNRYAFQAGEKLPESVDWREKGAVAPVKDQGQCGSCWAFSTVGAVEGINKIVTG
ELISLSEQELVDCDRSYNQGCNGGLMDYAFDFIKNNGGIDTEDDYPYHAQDGTCDPYRKN
ARVVSIEGYEDVPENDEKSLMKAVANQPVSVAIEGGGRAFQHYSSGVFTGYCGTQLDHGV
VVVGYGTENGEDYWIVRNSWGANWGESGYIKLQRNFANSTTGKCGIAMQASYPLKSGANP
PNPGPSPPTPVTPSTVCDEYYSCPQGTTCCCIYQYGEYCFGWGCCPYESATCCDDNYSCC
PHDYPVCDVDAGTCLMSKDNPLKVKALKRGPARVNWSGMKSNRKVSYV

Transcript Sequence

Gene sequence data has not been registered.